Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0420O-antigen polymerase isolog; Similar to GB:M60066 SP:P26479 PID:154343 percent identity: 26.15; identified by sequence similarity; putative. (380 aa)    
Predicted Functional Partners:
MJ_0419
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0419.
       0.950
MJ_0418
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0418.
       0.937
MJ_0421
Conserved hypothetical protein; Similar to GP:1786625 percent identity: 35.10; identified by sequence similarity; putative.
       0.910
MJ_0096
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0096.
   
    0.825
MJ_1375
SpoVB isolog; Similar to GB:D26185 SP:P37555 PID:467446 GB:AL009126 percent identity: 23.61; identified by sequence similarity; putative.
   
    0.825
MJ_1080
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1080.
  
  
 0.728
MJ_0417
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 33.33; identified by sequence similarity; putative.
       0.552
MJ_0505
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0505.
   
    0.464
MJ_0091
Na+/Ca+ exchanger protein, putative; Similar to SP:P45394 PID:606134 GB:U00096 PID:1789587 percent identity: 31.58; identified by sequence similarity; putative.
   
    0.433
MJ_0871
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 39.58; identified by sequence similarity; putative.
   
    0.433
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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