STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0437Conserved hypothetical protein; Similar to GP:1652335 percent identity: 34.43; identified by sequence similarity; putative. (79 aa)    
Predicted Functional Partners:
MJ_0953
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 52.00; identified by sequence similarity; putative.
  
 
 0.946
MJ_1309
Carbon monoxide dehydrogenase, hydrogenase anchor subunit CooM (cooM); Similar to GP:1515466 percent identity: 31.71; identified by sequence similarity; putative.
  
 
 0.924
MJ_0292
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 45.45; identified by sequence similarity; putative.
  
 
 0.923
MJ_1307
Conserved hypothetical protein; Similar to GP:1652336 percent identity: 36.73; identified by sequence similarity; putative.
   
 
 0.908
MJ_1310
Conserved hypothetical protein; Similar to GP:1652328 percent identity: 34.65; identified by sequence similarity; putative.
  
 
 0.908
MJ_1302
Photosystem I iron-sulfur center 1 isolog; Identified by sequence similarity; putative.
   
   0.876
MJ_1223
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1223.
   
 
 0.843
tgtA
Queuine tRNA-ribosyltransferase (tgtA); Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs. Can also utilize guanine as substrate.
       0.829
MJ_1362
NADH ubiquinone oxidoreductase, subunit 1 isolog; Similar to SP:P03887 percent identity: 24.02; identified by sequence similarity; putative.
   
   0.692
trm14
Conserved hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the methylation of the guanosine nucleotide at position 6 (m2G6) in tRNA(Cys).
       0.691
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.