STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0482Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 60.00; identified by sequence similarity; putative. (240 aa)    
Predicted Functional Partners:
tgtA
Queuine tRNA-ribosyltransferase (tgtA); Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs. Can also utilize guanine as substrate.
   
   0.740
MJ_0091
Na+/Ca+ exchanger protein, putative; Similar to SP:P45394 PID:606134 GB:U00096 PID:1789587 percent identity: 31.58; identified by sequence similarity; putative.
       0.685
MJ_0481
Zinc finger protein; Similar to GB:X59244 GB:X52358 SP:P17038 SP:P17040 SP:P28160 percent identity: 34.34; identified by sequence similarity; putative.
       0.583
MJ_1533
Conserved hypothetical protein; Similar to GB:X04021 PID:44719 PID:44720 percent identity: 67.05; identified by sequence similarity; putative.
  
     0.495
MJ_1127
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 46.18; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily.
 
     0.493
dut
Deoxycytidine triphosphate deaminase, putative (dcd); This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
 
     0.488
MJ_0981
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 28.18; identified by sequence similarity; putative.
 
     0.487
MJ_0106
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 38.16; identified by sequence similarity; putative.
 
     0.484
MJ_1582
Conserved hypothetical protein; Similar to GB:D26185 SP:P37545 PID:467428 GB:AL009126 percent identity: 35.37; identified by sequence similarity; putative.
 
     0.475
MJ_1198
Conserved hypothetical protein; Similar to GB:L77117 PID:1591827 percent identity: 100.00; identified by sequence similarity; putative.
  
     0.454
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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