Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MJ_0545Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0545. (251 aa)    
Predicted Functional Partners:
MJ_0547
Cell division inhibitor minD; Similar to GB:M95582 SP:Q01464 GB:M96343 PID:142859 PID:143216 percent identity: 36.26; identified by sequence similarity; putative; Belongs to the ParA family. MinD subfamily.
  
    0.990
MJ_0546
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0546.
  
    0.972
MJ_0544
Dolichyl-phosphate mannose synthase; Similar to GP:1150648 percent identity: 34.09; identified by sequence similarity; putative.
  
    0.842
MJ_0924
Capsular polysaccharide biosynthesis protein, putative (cap8B); Similar to GP:1657641 percent identity: 30.82; identified by sequence similarity; putative; To M.jannaschii MJ0547 and MJ0169.
  
    0.838
MJ_0548
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 31.00; identified by sequence similarity; putative.
       0.809
MJ_0169
Cell division inhibitor minD; Similar to GP:1001783 percent identity: 30.86; identified by sequence similarity; putative; Belongs to the ParA family. MinD subfamily.
  
    0.730
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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