STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0547Cell division inhibitor minD; Similar to GB:M95582 SP:Q01464 GB:M96343 PID:142859 PID:143216 percent identity: 36.26; identified by sequence similarity; putative; Belongs to the ParA family. MinD subfamily. (264 aa)    
Predicted Functional Partners:
MJ_0545
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0545.
  
    0.992
MJ_0546
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0546.
  
    0.992
MJ_0548
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 31.00; identified by sequence similarity; putative.
       0.889
MJ_0544
Dolichyl-phosphate mannose synthase; Similar to GP:1150648 percent identity: 34.09; identified by sequence similarity; putative.
  
  
 0.848
secD
Protein translocase, subunit SECD (secD); Involved in protein export.
 
     0.447
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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