STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0568Iron dependent repressor; Similar to GP:1777937 percent identity: 32.48; identified by sequence similarity; putative; Belongs to the DtxR/MntR family. (125 aa)    
Predicted Functional Partners:
MJ_0516
Carbon monoxide dehydrogenase, hydrogenase subunit CooL (cooL); Similar to GP:1515468 percent identity: 46.83; identified by sequence similarity; putative.
    
   0.748
MJ_1363
Formate hydrogenlyase, subunit 7; Similar to SP:P16433 GB:X17506 PID:41686 PID:882612 GB:U00096 percent identity: 38.28; identified by sequence similarity; putative.
    
   0.748
MJ_0567
Conserved hypothetical protein; Might be involved in Fe(2+) ion uptake (By similarity).
  
  
 0.712
MJ_1036
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1036.
  
  
 0.681
MJ_0566
Ferrous iron transport protein B (feoB); Probable transporter of a GTP-driven Fe(2+) uptake system, might be able to transport Fe(2+) into or out of the cell (Probable). Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.675
infB
Translation initiation factor aIF-2 (infB); Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (By similarity).
   
 
 0.614
MJ_0565
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0565.
       0.593
MJ_0463
Conserved hypothetical protein; Similar to SP:P14021 PID:44755 percent identity: 78.43; identified by sequence similarity; putative; Belongs to the SUI1 family.
   
   0.493
MJ_0971
Conserved hypothetical protein; Similar to GP:1707806 percent identity: 29.74; identified by sequence similarity; putative.
  
  
 0.491
eif5a
Translation initiation factor aIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
   
   0.487
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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