STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0573Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0573; Belongs to the OsmC/Ohr family. (189 aa)    
Predicted Functional Partners:
MJ_0574
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0574.
       0.670
MJ_0575
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 36.11; identified by sequence similarity; putative; To M.jannaschii MJ0838.
       0.670
MJ_0576
Malic acid transport protein; Similar to SP:P50537 percent identity: 23.78; identified by sequence similarity; putative.
       0.488
MJ_0572
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0572.
     
 0.487
MJ_0577
Conserved hypothetical protein; Similar to SP:P42297 PID:603780 PID:849027 GB:AL009126 percent identity: 31.54; identified by sequence similarity; putative.
     
 0.469
MJ_0571
Aspartate kinase (lysC); Similar to PID:928811 SP:P53553 percent identity: 40.95; identified by sequence similarity; putative; Belongs to the aspartokinase family.
  
    0.454
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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