STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0606Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 32.18; identified by sequence similarity; putative. (91 aa)    
Predicted Functional Partners:
MJ_0607
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0607.
       0.956
ppaC
Exopolyphosphatase (ppx1); Similar to SP:P38698 PID:453695 PID:458943 percent identity: 27.80; identified by sequence similarity; putative; Belongs to the PPase class C family.
       0.843
hemL
Glutamate-1-semialdehyde aminotransferase (hemL); Similar to GB:M57676 SP:P30949 PID:143040 GB:AL009126 percent identity: 51.67; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
  
    0.832
MJ_0604
Conserved hypothetical protein; Similar to PID:1652091 percent identity: 30.12; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family.
       0.566
MJ_0605
Hypothetical protein; Brute force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0605; Belongs to the UPF0332 family.
       0.566
MJ_0602
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0602.
       0.487
MJ_0810
Conserved hypothetical protein; Similar to GP:949850 percent identity: 33.11; identified by sequence similarity; putative.
       0.462
rqcH
Conserved hypothetical protein; Probably part of the ribosome quality control system (RQC). May mediate the addition of alanine residues (Ala tailing) to incompletely synthesized nascent chains from stalled ribosomes, leading to their degradation; Belongs to the NEMF family.
       0.446
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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