STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0609Amino acid transporter; Similar to GB:X77502 GB:X92657 PID:1890309 PID:608675 percent identity: 21.96; identified by sequence similarity; putative. (435 aa)    
Predicted Functional Partners:
MJ_1351
Glutamate synthase (gltB); Similar to GB:M18747 SP:P09831 GB:L20253 GB:M33743 GB:M68876 percent identity: 40.46; identified by sequence similarity; putative; Belongs to the glutamate synthase family.
  
  
 0.895
spcS
Conserved hypothetical protein; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.772
truB
Centromere/microtubule-binding protein (cbf5); Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.
   
 
 0.732
patS
Copper transporting P type ATPase (copA); Most probably acts as a phosphatase in the cytosol; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
      
 0.709
ppaC
Exopolyphosphatase (ppx1); Similar to SP:P38698 PID:453695 PID:458943 percent identity: 27.80; identified by sequence similarity; putative; Belongs to the PPase class C family.
     
 0.494
trpF
Phosphoribosylanthranilate isomerase (trpF); Similar to GB:M83788 PID:149038 SP:P52563 percent identity: 41.23; identified by sequence similarity; putative; Belongs to the TrpF family.
   
 
 0.486
mfnA
Group II decarboxylase; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis.
 
  
 0.481
pstS
Periplasmic phosphate-binding protein (pstS); Part of the ABC transporter complex PstSACB involved in phosphate import.
 
  
 0.453
MJ_0920
GTP-binding protein homologue (yphC); Similar to PID:1146219 SP:P50743 GB:AL009126 percent identity: 26.99; identified by sequence similarity; putative.
  
 
 0.447
MJ_0305
Conserved hypothetical protein; Similar to GP:1787876 percent identity: 27.99; identified by sequence similarity; putative.
 
 
 
 0.422
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.