Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MJ_0640Conserved hypothetical protein; Similar to GP:1001832 percent identity: 33.81; identified by sequence similarity; putative. (324 aa)    
Predicted Functional Partners:
pgk
Phosphoglycerate kinase (pgk); Similar to GB:M55529 SP:P20971 PID:149808 percent identity: 56.76; identified by sequence similarity; putative; Belongs to the phosphoglycerate kinase family.
       0.848
MJ_0639
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0639.
       0.789
MJ_0638
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0638.
       0.785
pheA
Chorismate mutase/prephenate dehydratase (pheA); Similar to SP:P43909 PID:683585 percent identity: 38.59; identified by sequence similarity; putative.
       0.784
nifB
nifB protein (nifB); Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster.
       0.685
MJ_1371
Methlytransferase; Similar to GP:2437836 percent identity: 39.09; identified by sequence similarity; putative; Belongs to the MtxX family.
       0.671
MJ_0065
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 48.48; identified by sequence similarity; putative.
       0.573
MJ_1412
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 37.85; identified by sequence similarity; putative; Belongs to the UPF0288 family.
       0.423
queE
Coenzyme PQQ synthesis protein III isolog (Haemophilus influenzae}; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
       0.423
MJ_0805
Conserved hypothetical protein; Similar to PID:1419841 percent identity: 27.98; identified by sequence similarity; putative.
       0.420
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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