Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0662Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0662. (239 aa)    
Predicted Functional Partners:
MJ_0661
Conserved hypothetical protein; Similar to GP:1001294 percent identity: 32.39; identified by sequence similarity; putative; To H.pylori HP0274.
  
    0.862
rpl6
LSU ribosomal protein L6P (rplF); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.810
atpC
H+-transporting ATP synthase, subunit C (atpC); Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.770
atpI
H+-transporting ATP synthase, subunit I (atpI); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family.
   
 
 0.733
atpF
H+-transporting ATP synthase, subunit F (atpF); Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.721
MJ_0663
Acetolactate synthase large subunit (ilvB); Similar to GB:L10328 SP:P08142 GB:J01633 GB:X02541 PID:146455 percent identity: 30.21; identified by sequence similarity; putative; Belongs to the TPP enzyme family.
     
 0.589
MJ_0664
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0664.
     
 0.525
MJ_0660
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 60.00; identified by sequence similarity; putative.
       0.511
mfnA
Group II decarboxylase; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis.
   
 
 0.470
bioF
8-amino-7-oxononanoate synthase (bioF); Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
   
 
 0.468
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.