Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MJ_0695 | MJ_0696 | MJ_0695 | MJ_0696 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0695; To M.jannaschii MJ0803. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0696. | 0.751 |
| MJ_0696 | MJ_0695 | MJ_0696 | MJ_0695 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0696. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0695; To M.jannaschii MJ0803. | 0.751 |
| MJ_0696 | flpA | MJ_0696 | MJ_0697 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0696. | Fibrillarin (fib); Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. | 0.555 |
| flpA | MJ_0696 | MJ_0697 | MJ_0696 | Fibrillarin (fib); Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0696. | 0.555 |