STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0706Conserved hypothetical protein; Similar to GP:1653340 percent identity: 31.00; identified by sequence similarity; putative. (214 aa)    
Predicted Functional Partners:
hmgA
3-hydroxy-3-methylglutaryl coenzyme A reductase; Converts HMG-CoA to mevalonate.
       0.955
MJ_0440
Conserved hypothetical protein; Similar to SP:P29085 GB:X67205 PID:45951 percent identity: 38.82; identified by sequence similarity; putative.
     
 0.775
MJ_0704
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0704.
  
    0.773
MJ_1627
Conserved hypothetical protein; Similar to GP:1669357 percent identity: 35.34; identified by sequence similarity; putative; Belongs to the UPF0179 family.
     
 0.675
egsA
Glycerol dehydrogenase (gldA); Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
  
  
 0.596
MJ_0703.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0703.1.
       0.499
MJ_0703
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA2); Similar to SP:P05324 PID:150050 PID:44716 percent identity: 30.36; identified by sequence similarity; putative; Belongs to the HisA/HisF family.
       0.433
argS
arginyl-tRNA synthetase (argS); Identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.431
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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