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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0715H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase-related protein (hmd); Similar to PID:1149527 SP:Q50840 percent identity: 29.86; identified by sequence similarity; putative; Belongs to the HMD family. (338 aa)    
Predicted Functional Partners:
MJ_1339
Protein with ATP/GTP-binding site; Similar to SP:P04766 GB:X04399 PID:39954 percent identity: 32.65; identified by sequence similarity; putative; To M.thermoautotrophicum MTH765.
  
    0.954
MJ_0714
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 61.40; identified by sequence similarity; putative; To M.jannaschii MJ0310 and MJ1340.
  
    0.896
MJ_0785
Biotin synthetase, putative (bioB); Similar to GB:M27867 SP:P19206 PID:142591 PID:520750 percent identity: 27.43; identified by sequence similarity; putative.
      
 0.800
MJ_0310
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 60.53; identified by sequence similarity; putative.
  
    0.727
MJ_1340
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 61.40; identified by sequence similarity; putative; To M.jannaschii MJ0310 and MJ0714.
  
    0.727
proS
prolyl-tRNA synthetase (proS); Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). Can inadvertently accommodate and process non-cognate amino acids such as cysteine and alanine.
      
 0.686
MJ_0716
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0716.
       0.665
cca
tRNA nucleotidyltransferase (cca); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Archaeal CCA-adding enzyme subfamily.
     
 0.649
MJ_0311
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0311.
  
    0.517
MJ_1389
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1389.
  
    0.517
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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