Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MJ_0722 | ptr2 | MJ_0722 | MJ_0723 | Ferredoxin (fdxA); Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex. | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | 0.847 |
| MJ_0746 | ptr2 | MJ_0746 | MJ_0723 | Conserved hypothetical protein; Similar to PID:710357 GB:AE000666 percent identity: 70.59; identified by sequence similarity; putative. | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | 0.717 |
| MJ_1351 | ptr2 | MJ_1351 | MJ_0723 | Glutamate synthase (gltB); Similar to GB:M18747 SP:P09831 GB:L20253 GB:M33743 GB:M68876 percent identity: 40.46; identified by sequence similarity; putative; Belongs to the glutamate synthase family. | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | 0.721 |
| MJ_1351 | tfb | MJ_1351 | MJ_0782 | Glutamate synthase (gltB); Similar to GB:M18747 SP:P09831 GB:L20253 GB:M33743 GB:M68876 percent identity: 40.46; identified by sequence similarity; putative; Belongs to the glutamate synthase family. | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.715 |
| ptr2 | MJ_0722 | MJ_0723 | MJ_0722 | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | Ferredoxin (fdxA); Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex. | 0.847 |
| ptr2 | MJ_0746 | MJ_0723 | MJ_0746 | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | Conserved hypothetical protein; Similar to PID:710357 GB:AE000666 percent identity: 70.59; identified by sequence similarity; putative. | 0.717 |
| ptr2 | MJ_1351 | MJ_0723 | MJ_1351 | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | Glutamate synthase (gltB); Similar to GB:M18747 SP:P09831 GB:L20253 GB:M33743 GB:M68876 percent identity: 40.46; identified by sequence similarity; putative; Belongs to the glutamate synthase family. | 0.721 |
| ptr2 | tbp | MJ_0723 | MJ_0507 | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | Transcription initiation factor IID, TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity). | 0.930 |
| ptr2 | tfb | MJ_0723 | MJ_0782 | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.886 |
| ptr2 | tfe | MJ_0723 | MJ_0777 | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | Putative transcription initiation factor (TFIIE, subunit alpha); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and d [...] | 0.690 |
| tbp | ptr2 | MJ_0507 | MJ_0723 | Transcription initiation factor IID, TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity). | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | 0.930 |
| tbp | tfb | MJ_0507 | MJ_0782 | Transcription initiation factor IID, TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity). | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.999 |
| tbp | tfe | MJ_0507 | MJ_0777 | Transcription initiation factor IID, TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity). | Putative transcription initiation factor (TFIIE, subunit alpha); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and d [...] | 0.997 |
| tfb | MJ_1351 | MJ_0782 | MJ_1351 | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | Glutamate synthase (gltB); Similar to GB:M18747 SP:P09831 GB:L20253 GB:M33743 GB:M68876 percent identity: 40.46; identified by sequence similarity; putative; Belongs to the glutamate synthase family. | 0.715 |
| tfb | ptr2 | MJ_0782 | MJ_0723 | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | 0.886 |
| tfb | tbp | MJ_0782 | MJ_0507 | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | Transcription initiation factor IID, TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity). | 0.999 |
| tfb | tfe | MJ_0782 | MJ_0777 | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | Putative transcription initiation factor (TFIIE, subunit alpha); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and d [...] | 0.998 |
| tfe | ptr2 | MJ_0777 | MJ_0723 | Putative transcription initiation factor (TFIIE, subunit alpha); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and d [...] | Transcriptional regulatory protein, AsnC family; Participates in positive as well as negative regulation of transcription. Binds to its own promoter. | 0.690 |
| tfe | tbp | MJ_0777 | MJ_0507 | Putative transcription initiation factor (TFIIE, subunit alpha); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and d [...] | Transcription initiation factor IID, TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation (By similarity). | 0.997 |
| tfe | tfb | MJ_0777 | MJ_0782 | Putative transcription initiation factor (TFIIE, subunit alpha); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and d [...] | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.998 |