STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0749Conserved hypothetical protein; Similar to GP:1787226 percent identity: 31.17; identified by sequence similarity; putative. (246 aa)    
Predicted Functional Partners:
MJ_1302
Photosystem I iron-sulfur center 1 isolog; Identified by sequence similarity; putative.
  
 
 0.825
MJ_0764
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0764.
  
  
 0.549
MJ_0061
Ferredoxin; Similar to SP:P21305 percent identity: 42.86; identified by sequence similarity; putative.
  
 
 0.546
MJ_0146
2-ketoglutarate ferredoxin oxidoreductase, subunit delta (korD); Similar to GB:M63654 SP:P23481 PID:147018 GB:U00096 PID:1788826 percent identity: 36.92; identified by sequence similarity; putative.
  
 
 0.546
MJ_0199
Ferredoxin; Similar to SP:P21305 percent identity: 74.58; identified by sequence similarity; putative.
  
 
 0.546
MJ_0251
Ferredoxin II; Similar to SP:P00211 percent identity: 37.04; identified by sequence similarity; putative.
  
 
 0.546
MJ_0722
Ferredoxin (fdxA); Ferredoxins are iron-sulfur proteins that transfer electrons probably in the CO-dehydrogenase complex.
  
 
 0.546
fwdE
Formylmethanofuran dehydrogenase, subunit E (tungsten) (fwdE); Similar to PID:871458 GB:AE000666 PID:1890206 percent identity: 41.22; identified by sequence similarity; putative.
  
 
 0.546
MJ_0750
Ferredoxin-type protein (napH); Similar to SP:P33934 PID:405929 GB:U00096 PID:1788532 percent identity: 25.27; identified by sequence similarity; putative.
 
    
0.545
fprA
Flavoprotein (fpaA); Probably functions as an electron acceptor for a hydrogenase; however there is an uncharacterized intermediate between the hydrogenase and flavoprotein A; In the N-terminal section; belongs to the zinc metallo- hydrolase group 3 family.
  
  
 0.529
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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