STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0754Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0754. (185 aa)    
Predicted Functional Partners:
MJ_0753
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0753.
       0.918
MJ_0750
Ferredoxin-type protein (napH); Similar to SP:P33934 PID:405929 GB:U00096 PID:1788532 percent identity: 25.27; identified by sequence similarity; putative.
 
    0.798
MJ_0229
Arsenical resistance operon repressor; Similar to GP:1652944 percent identity: 36.21; identified by sequence similarity; putative.
  
    0.692
MJ_0755
N-acetylmuramoyl-L-alanine amidase; Similar to GB:D10388 SP:Q02114 GB:M81324 PID:142806 PID:143159 percent identity: 34.19; identified by sequence similarity; putative.
  
    0.530
MJ_0752
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0752; To M.jannaschii MJ0857 N-terminal region.
       0.444
MJ_0751
Conserved hypothetical protein; Similar to GP:1707749 percent identity: 33.56; identified by sequence similarity; putative; In the N-terminal section; belongs to the transposase 2 family.
 
     0.416
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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