STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0779Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 23.56; identified by sequence similarity; putative. (299 aa)    
Predicted Functional Partners:
MJ_0780
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0780.
  
  
 0.998
MJ_0781
Type II secretion system protein; Similar to GP:1707774 percent identity: 37.14; identified by sequence similarity; putative; Belongs to the GSP E family.
  
  
 0.847
tfb
Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
       0.787
MJ_0782.1
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 48.08; identified by sequence similarity; putative; To M.thermoautotrophicum MTH886.
       0.616
MJ_0900
Type II secretion system protein; Identified by sequence similarity; putative; Belongs to the GSP E family.
  
  
 0.551
MJ_1288
Type II secretion system protein; Similar to GP:1707774 percent identity: 29.44; identified by sequence similarity; putative; Belongs to the GSP E family.
  
  
 0.551
MJ_1287
Type II secretion system protein, putative; Similar to GP:1707774 percent identity: 37.88; identified by sequence similarity; putative; Belongs to the GSP E family.
  
  
 0.509
trm14
Conserved hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the methylation of the guanosine nucleotide at position 6 (m2G6) in tRNA(Cys).
       0.431
MJ_1464
Hypothetical GTP-binding protein (SP:P40010); Similar to SP:P40010 PID:603598 percent identity: 34.59; identified by sequence similarity; putative; Belongs to the TRAFAC class YlqF/YawG GTPase family.
       0.431
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.