STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0793Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0793. (178 aa)    
Predicted Functional Partners:
MJ_0794
Hypothetical transmembrane protein; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0794.
       0.628
MJ_0792.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0792.1.
       0.590
MJ_0795
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0795.
       0.467
MJ_0795.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0795.1.
       0.467
MJ_0796
ABC transporter, ATP-binding protein; Similar to SP:P10346 PID:581098 GB:U00096 PID:1651363 PID:1651364 percent identity: 47.83; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
    0.466
MJ_0792
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0792.
       0.463
MJ_0798
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.77; identified by sequence similarity; putative.
 
     0.462
MJ_0796.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0796.1.
       0.438
MJ_1574
ATP-dependent RNA helicase, eIF-4A family, putative; Similar to PID:1146178 SP:P50830 GB:AL009126 percent identity: 33.09; identified by sequence similarity; putative; Belongs to the helicase family.
  
    0.432
MJ_0797
Hypothetical protein; Similar to PID:1653948 percent identity: 28.10; identified by sequence similarity; putative.
       0.428
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.