Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0796ABC transporter, ATP-binding protein; Similar to SP:P10346 PID:581098 GB:U00096 PID:1651363 PID:1651364 percent identity: 47.83; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (235 aa)    
Predicted Functional Partners:
MJ_0797
Hypothetical protein; Similar to PID:1653948 percent identity: 28.10; identified by sequence similarity; putative.
 
 0.998
MJ_1507
Hypothetical protein; Similar to PID:1653948 percent identity: 32.05; identified by sequence similarity; putative.
 
 0.992
MJ_1023
ABC transporter ATP-binding protein; Similar to SP:P26946 GB:X59424 PID:39478 percent identity: 49.17; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
0.924
MJ_0794
Hypothetical transmembrane protein; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0794.
       0.851
MJ_0796.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0796.1.
       0.789
MJ_0795
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0795.
  
    0.783
MJ_0687
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 40.25; identified by sequence similarity; putative.
   
 
 0.720
MJ_0795.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0795.1.
       0.720
MJ_0798
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.77; identified by sequence similarity; putative.
     
 0.708
MJ_0799
Phosphoribosylformylglycinamidine cyclo-ligase isolog (purM); Similar to GB:J02732 SP:P12043 PID:143371 GB:AL009126 percent identity: 27.41; identified by sequence similarity; putative; To Synechocystis PCC 6803 sll0787 and M.jannaschii MJ0640.
       0.708
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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