STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0797Hypothetical protein; Similar to PID:1653948 percent identity: 28.10; identified by sequence similarity; putative. (367 aa)    
Predicted Functional Partners:
MJ_0796
ABC transporter, ATP-binding protein; Similar to SP:P10346 PID:581098 GB:U00096 PID:1651363 PID:1651364 percent identity: 47.83; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 0.999
MJ_1508
ABC transporter, probable ATP-binding subunit; Similar to GB:L42023 SP:P45247 PID:1007753 PID:1221696 PID:1205784 percent identity: 43.89; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 0.995
ecfA
Cobalt transport ATP-binding protein (cbiO); ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    0.907
MJ_1572
Cobalt transport ATP-binding protein (cbiO); Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 
    0.907
MJ_0412
Nitrate transporter protein (nrtC) homolog (cmpC); Similar to PID:1019380 percent identity: 47.43; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
      0.902
MJ_0121
SN-glycerol-3-phosphate transport ATP-binding protein (ugpC); Similar to SP:P10907 GB:U00039 PID:43249 PID:912455 GB:U00096 percent identity: 32.54; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
 
 0.881
MJ_0089
Ferric enterobactin transport ATP-binding protein; Similar to SP:P23878 GB:X57471 PID:41432 GB:U00096 PID:1778504 percent identity: 33.07; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  
 0.864
MJ_0794
Hypothetical transmembrane protein; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0794.
       0.775
MJ_0796.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0796.1.
       0.752
MJ_0798
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.77; identified by sequence similarity; putative.
  
   0.751
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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