STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0801Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0801; Belongs to the archaeal ATPase family. (379 aa)    
Predicted Functional Partners:
MJ_0800
(R)-2-hydroxyglutaryl-CoA dehydratase activator; Similar to SP:P11568 GB:X59645 PID:433932 percent identity: 31.78; identified by sequence similarity; putative.
       0.699
MJ_0798
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.77; identified by sequence similarity; putative.
     
 0.509
MJ_0799
Phosphoribosylformylglycinamidine cyclo-ligase isolog (purM); Similar to GB:J02732 SP:P12043 PID:143371 GB:AL009126 percent identity: 27.41; identified by sequence similarity; putative; To Synechocystis PCC 6803 sll0787 and M.jannaschii MJ0640.
       0.482
MJ_0797
Hypothetical protein; Similar to PID:1653948 percent identity: 28.10; identified by sequence similarity; putative.
       0.457
MJ_0796
ABC transporter, ATP-binding protein; Similar to SP:P10346 PID:581098 GB:U00096 PID:1651363 PID:1651364 percent identity: 47.83; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
       0.455
MJ_0802
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 32.96; identified by sequence similarity; putative.
       0.445
MJ_0796.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0796.1.
       0.444
MJ_0795
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0795.
       0.415
MJ_0795.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0795.1.
       0.415
MJ_0803
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0803.
       0.405
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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