STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0819Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0819; Belongs to the archaeal ATPase family. (109 aa)    
Predicted Functional Partners:
MJ_0820
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0820; Belongs to the archaeal ATPase family.
       0.773
MJ_0816
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0816.
       0.468
asd-2
Phosphatidylserine decarboxylase proenzyme 2 precursor (psd2); Catalyzes the formation of archaetidylethanolamine (PtdEtn) from archaetidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.
       0.468
MJ_0818
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0818.
       0.468
mfnD
Conserved hypothetical protein; Catalyzes the formation of an amide bond between tyramine and the gamma carboxy group of L-glutamate. The enzyme also accepts phenylethylamine in vitro.
       0.422
MJ_0821
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0821; Belongs to the archaeal ATPase family.
       0.418
cbiH
Cobalamin biosynthesis precorrin-3 methylase (cbiH); Methyltransferase that likely catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV. May also convert cobalt-precorrin-3 to cobalt-precorrin-4 (By similarity).
       0.405
dys
Deoxyhypusine synthase (dys1); Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.
       0.405
MJ_0811
Conserved hypothetical protein; Similar to GB:L10328 SP:P03818 PID:290594 PID:2367274 percent identity: 35.29; identified by sequence similarity; putative.
       0.403
MJ_0812
Conserved hypothetical protein; Similar to GB:L10328 SP:P31473 PID:290596 GB:U00096 PID:2367275 percent identity: 34.94; identified by sequence similarity; putative.
       0.403
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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