STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0865Conserved hypothetical protein; Similar to PID:1061002 percent identity: 34.05; identified by sequence similarity; putative. (449 aa)    
Predicted Functional Partners:
MJ_1530
Ribosomal protein S18 alanine acetyltransferase; Similar to GP:1707812 percent identity: 36.11; identified by sequence similarity; putative.
  
    0.781
MJ_0866
HIT family protein (hit); Similar to SP:Q04344 PID:1431187 PID:3499 percent identity: 39.34; identified by sequence similarity; putative.
       0.722
MJ_0119
Carbon monoxide dehydrogenase gamma subunit (cdhE) isolog; Similar to PID:1002692 SP:Q50539 percent identity: 42.86; identified by sequence similarity; putative.
 
     0.624
hdrC2
Heterodisulfide reductase, subunit C2 (hdrC2); Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B); Belongs to the HdrC family.
     
 0.547
MJ_0841
Conserved hypothetical protein; Radical SAM methyltransferase that is responsible for the C(5)-methylation of 'Arg-274' of the methyl-coenzyme M reductase (MCR) subunit alpha McrA. This post-translational methylation, despite being not essential in vivo, plays a role for the stability and structural integrity of MCR.
 
     0.497
MJ_0150
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0150; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0716
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0716.
  
  
 0.496
MJ_0739
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0739; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0745
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0745; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0855
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0855.
  
  
 0.496
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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