STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0873Ferric enterobactin transport ATP-binding protein; Similar to SP:P23878 GB:X57471 PID:41432 GB:U00096 PID:1778504 percent identity: 35.86; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (290 aa)    
Predicted Functional Partners:
MJ_0087
Hemin permease (hemU); Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.991
MJ_0876
iron(III) dicitrate transport system permease protein; Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.984
MJ_0874
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0874; To B.subtilis YdcN C-terminal region.
      0.973
MJ_0085
Iron transport periplasmic binding protein, putative (ceuE); Similar to PID:1107531 percent identity: 25.10; identified by sequence similarity; putative.
  
 
 0.947
MJ_0872
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0872.
 
     0.848
livF
High-affinity branched-chain amino acid transport ATP-binding protein (braG); Probable component of a branched-chain amino-acid transport system.
   
 0.825
cobQ
Cobyric acid synthase (cbiP); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (By similarity); Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.736
MJ_0878
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0878.
 
     0.694
MJ_0642
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0642.
 
     0.679
MJ_1572
Cobalt transport ATP-binding protein (cbiO); Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
 
  
0.613
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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