STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flaB2Flagellin B2 (flaB2); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (217 aa)    
Predicted Functional Partners:
flaB1
Flagellin B1 (flaB1); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
   
 
0.999
flaB3
Flagellin B3 (flaB3); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
0.999
flaC
Flagella-related protein C, putative; Similar to GP:2104775 percent identity: 59.12; identified by sequence similarity; putative.
  
  
 0.999
flaD
Flagella-related protein D, putative; Similar to GP:2104776 percent identity: 42.48; identified by sequence similarity; putative.
  
  
 0.999
flaE
Flagella-related protein E, putative; Similar to GP:2104777 percent identity: 65.65; identified by sequence similarity; putative.
  
  
 0.997
flaF
Conserved hypothetical protein; Similar to GP:1707777 percent identity: 31.67; identified by sequence similarity; putative.
  
  
 0.995
flaG
Flagella-related protein G, putative; Similar to GP:2104779 percent identity: 46.67; identified by sequence similarity; putative.
  
  
 0.983
aglB
Putative transmembrane oligosaccharyl transferase; Oligosaccharyl transferase (OST) that catalyzes the initial transfer of a defined glycan (ManNAcGlc-2,3-diNAcAGlcNAc in Methanococci) from the lipid carrier dolichol-monophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. Involved in the assembly of an N-linked disaccharide that decorates the S-layer glycoprotein and flagellins.
     
 0.743
MJ_0260
Signal sequence peptidase I, SEC11; Similar to GB:Z47047 SP:P15367 PID:4433 PID:557828 PID:763367 percent identity: 36.52; identified by sequence similarity; putative.
      
 0.719
flaK
Hypothetical protein; Cleaves the N-terminal leader peptide from preflagellins.
     
 0.694
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.