Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
flaHFlagella-related protein H, putative; Similar to GP:2104780 percent identity: 67.39; identified by sequence similarity; putative. (233 aa)    
Predicted Functional Partners:
flaJ
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 28.40; identified by sequence similarity; putative; To M.jannaschii MJ1286.
 
  
 0.995
MJ_0900
Type II secretion system protein; Identified by sequence similarity; putative; Belongs to the GSP E family.
 
  
 0.984
flaF
Conserved hypothetical protein; Similar to GP:1707777 percent identity: 31.67; identified by sequence similarity; putative.
  
  
 0.976
flaD
Flagella-related protein D, putative; Similar to GP:2104776 percent identity: 42.48; identified by sequence similarity; putative.
  
  
 0.959
flaG
Flagella-related protein G, putative; Similar to GP:2104779 percent identity: 46.67; identified by sequence similarity; putative.
  
  
 0.959
flaE
Flagella-related protein E, putative; Similar to GP:2104777 percent identity: 65.65; identified by sequence similarity; putative.
  
  
 0.954
flaC
Flagella-related protein C, putative; Similar to GP:2104775 percent identity: 59.12; identified by sequence similarity; putative.
  
  
 0.947
flaK
Hypothetical protein; Cleaves the N-terminal leader peptide from preflagellins.
     
 0.874
MJ_0906
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0906.
 
     0.874
MJ_1288
Type II secretion system protein; Similar to GP:1707774 percent identity: 29.44; identified by sequence similarity; putative; Belongs to the GSP E family.
 
  
 0.860
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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