STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flaKHypothetical protein; Cleaves the N-terminal leader peptide from preflagellins. (238 aa)    
Predicted Functional Partners:
flaJ
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 28.40; identified by sequence similarity; putative; To M.jannaschii MJ1286.
     
 0.967
flaH
Flagella-related protein H, putative; Similar to GP:2104780 percent identity: 67.39; identified by sequence similarity; putative.
     
 0.930
flaF
Conserved hypothetical protein; Similar to GP:1707777 percent identity: 31.67; identified by sequence similarity; putative.
     
 0.856
flaC
Flagella-related protein C, putative; Similar to GP:2104775 percent identity: 59.12; identified by sequence similarity; putative.
     
 0.814
MJ_0900
Type II secretion system protein; Identified by sequence similarity; putative; Belongs to the GSP E family.
     
 0.789
flaB1
Flagellin B1 (flaB1); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
     
 0.769
flaG
Flagella-related protein G, putative; Similar to GP:2104779 percent identity: 46.67; identified by sequence similarity; putative.
       0.724
flaB2
Flagellin B2 (flaB2); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
     
 0.694
MJ_0905
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0905.
       0.633
MJ_0906
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0906.
       0.633
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.