Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MJ_0906Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0906. (366 aa)    
Predicted Functional Partners:
MJ_0905
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0905.
  
  
 0.993
flaJ
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 28.40; identified by sequence similarity; putative; To M.jannaschii MJ1286.
 
   
 0.891
MJ_0904
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0904.
     
 0.878
flaH
Flagella-related protein H, putative; Similar to GP:2104780 percent identity: 67.39; identified by sequence similarity; putative.
 
     0.874
MJ_0903
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0903.
     
 0.829
rps5
SSU ribosomal protein S5P (rpsE); With S4 and S12 plays an important role in translational accuracy.
    
 0.748
flaG
Flagella-related protein G, putative; Similar to GP:2104779 percent identity: 46.67; identified by sequence similarity; putative.
       0.716
flaF
Conserved hypothetical protein; Similar to GP:1707777 percent identity: 31.67; identified by sequence similarity; putative.
       0.696
MJ_0774
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0774.
 
     0.663
rps9
SSU ribosomal protein S9P (rpsI); Similar to SP:P05763 GB:M76567 PID:148778 percent identity: 50.39; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uS9 family.
    
 0.662
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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