STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0907Chondro-6-sulfatase regulatory protein isolog; Similar to SP:Q02550 PID:143939 percent identity: 31.98; identified by sequence similarity; putative. (286 aa)    
Predicted Functional Partners:
MJ_0908
Cobalamin biosynthesis protein (cobN); Similar to GB:M62866 SP:P29929 PID:151154 percent identity: 37.24; identified by sequence similarity; putative; Belongs to the Mg-chelatase subunit H family.
       0.602
secD
Protein translocase, subunit SECD (secD); Involved in protein export.
     
 0.503
secF
Protein translocase, subunit SECF (secF); Involved in protein export.
     
 0.476
MJ_0304
Ferripyochelin binding protein (fbp); Similar to GB:M82832 SP:P40882 PID:151224 percent identity: 52.82; identified by sequence similarity; putative; Belongs to the gamma-class carbonic anhydrase family.
       0.431
tgtA
Queuine tRNA-ribosyltransferase (tgtA); Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs. Can also utilize guanine as substrate.
       0.431
MJ_0441
Conserved hypothetical protein; Similar to GB:L42023 SP:P44070 PID:1006005 PID:1221007 PID:1205150 percent identity: 29.41; identified by sequence similarity; putative.
       0.431
MJ_1295
Conserved hypothetical protein; Similar to GP:1787520 percent identity: 31.95; identified by sequence similarity; putative.
       0.431
MJ_0865
Conserved hypothetical protein; Similar to PID:1061002 percent identity: 34.05; identified by sequence similarity; putative.
 
  
 0.429
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.