STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0920GTP-binding protein homologue (yphC); Similar to PID:1146219 SP:P50743 GB:AL009126 percent identity: 26.99; identified by sequence similarity; putative. (185 aa)    
Predicted Functional Partners:
MJ_0919
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0919.
  
    0.951
MJ_0104
DNA-binding protein, probably DNA helicase; Similar to GB:M64979 GB:L14754 GB:L24544 SP:P38935 PID:401776 percent identity: 34.98; identified by sequence similarity; putative; Belongs to the DNA2/NAM7 helicase family.
  
 0.855
MJ_0912
Conserved hypothetical protein; Similar to GP:1788638 percent identity: 31.17; identified by sequence similarity; putative.
  
 0.855
MJ_0215
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0215; To M.jannaschii MJECL20.
  
 0.851
MJ_0827
Membrane protein, putative regulator of cation conductance; Similar to GB:M81635 GB:X60067 SP:P27105 PID:1161562 PID:181184 percent identity: 42.63; identified by sequence similarity; putative.
  
 0.799
MJ_0828
Conserved hypothetical protein; Similar to GB:M35130 PID:150075 percent identity: 66.15; identified by sequence similarity; putative.
  
 0.799
pgk
Phosphoglycerate kinase (pgk); Similar to GB:M55529 SP:P20971 PID:149808 percent identity: 56.76; identified by sequence similarity; putative; Belongs to the phosphoglycerate kinase family.
  
 
 
 0.794
MJ_0921
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 51.79; identified by sequence similarity; putative.
       0.778
MJ_0922
Conserved hypothetical protein; Identified by sequence similarity; putative.
  
 0.770
MJ_1226
Plasma membrane ATPase 1 (aha1); Similar to SP:P20649 percent identity: 44.42; identified by sequence similarity; putative; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
  
 0.765
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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