STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0924Capsular polysaccharide biosynthesis protein, putative (cap8B); Similar to GP:1657641 percent identity: 30.82; identified by sequence similarity; putative; To M.jannaschii MJ0547 and MJ0169. (263 aa)    
Predicted Functional Partners:
MJ_0925
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0925.
       0.903
MJ_0546
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0546.
  
    0.844
MJ_0545
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0545.
  
    0.838
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.