Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MJ_0927 | MJ_0938 | MJ_0927 | MJ_0938 | Conserved hypothetical protein; DNA-binding protein exhibiting the ability to bind to both single-stranded and double-stranded DNA; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | 0.431 |
MJ_0927 | pstB | MJ_0927 | MJ_1012 | Conserved hypothetical protein; DNA-binding protein exhibiting the ability to bind to both single-stranded and double-stranded DNA; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Phosphate specific transport complex component (pstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.895 |
MJ_0938 | MJ_0927 | MJ_0938 | MJ_0927 | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | Conserved hypothetical protein; DNA-binding protein exhibiting the ability to bind to both single-stranded and double-stranded DNA; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.431 |
MJ_0938 | MJ_0939 | MJ_0938 | MJ_0939 | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0939. | 0.638 |
MJ_0938 | MJ_1439 | MJ_0938 | MJ_1439 | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | Thermonuclease; Similar to GB:L23973 SP:P43270 PID:532653 percent identity: 36.72; identified by sequence similarity; putative; Belongs to the thermonuclease family. | 0.431 |
MJ_0938 | pstB | MJ_0938 | MJ_1012 | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | Phosphate specific transport complex component (pstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.516 |
MJ_0939 | MJ_0938 | MJ_0939 | MJ_0938 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0939. | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | 0.638 |
MJ_1439 | MJ_0938 | MJ_1439 | MJ_0938 | Thermonuclease; Similar to GB:L23973 SP:P43270 PID:532653 percent identity: 36.72; identified by sequence similarity; putative; Belongs to the thermonuclease family. | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | 0.431 |
pstB | MJ_0927 | MJ_1012 | MJ_0927 | Phosphate specific transport complex component (pstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | Conserved hypothetical protein; DNA-binding protein exhibiting the ability to bind to both single-stranded and double-stranded DNA; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.895 |
pstB | MJ_0938 | MJ_1012 | MJ_0938 | Phosphate specific transport complex component (pstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. | 0.516 |