STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_0938Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative. (250 aa)    
Predicted Functional Partners:
MJ_0939
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0939.
  
  
 0.638
pstB
Phosphate specific transport complex component (pstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
    0.516
MJ_0927
Conserved hypothetical protein; DNA-binding protein exhibiting the ability to bind to both single-stranded and double-stranded DNA; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.431
MJ_1439
Thermonuclease; Similar to GB:L23973 SP:P43270 PID:532653 percent identity: 36.72; identified by sequence similarity; putative; Belongs to the thermonuclease family.
       0.431
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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