Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MJ_0939Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0939. (276 aa)    
Predicted Functional Partners:
MJ_0938
Conserved hypothetical protein; Similar to GP:1786699 percent identity: 35.17; identified by sequence similarity; putative.
  
  
 0.630
MJ_0940
Transformation sensitive protein; Similar to GB:M86752 SP:P31948 PID:184565 percent identity: 30.84; identified by sequence similarity; putative.
       0.527
MJ_0941
Hypothetical protein; ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0941.
       0.405
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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