STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
patSCopper transporting P type ATPase (copA); Most probably acts as a phosphatase in the cytosol; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily. (273 aa)    
Predicted Functional Partners:
MJ_1226
Plasma membrane ATPase 1 (aha1); Similar to SP:P20649 percent identity: 44.42; identified by sequence similarity; putative; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily.
  
   
 0.924
MJ_0609
Amino acid transporter; Similar to GB:X77502 GB:X92657 PID:1890309 PID:608675 percent identity: 21.96; identified by sequence similarity; putative.
      
 0.709
MJ_0967
Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 33.77; identified by sequence similarity; putative; Belongs to the peptidase C56 family.
 
     0.619
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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