STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapB2Hypothetical protein; Possibly the antitoxin component of a type II toxin-antitoxin (TA) system. Its cognate toxin is VapC2 (Potential). (68 aa)    
Predicted Functional Partners:
vapC2
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. An RNase. Its cognate antitoxin is VapB2 (By similarity). Belongs to the PINc/VapC protein family.
     
 0.971
vapC4
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. An RNase. Its cognate antitoxin is VapB4 (By similarity). Belongs to the PINc/VapC protein family.
      
 0.878
vapC3
Virulence associated protein C (vapC); Toxic component of a type II toxin-antitoxin (TA) system. An RNase. Its cognate antitoxin is VapB3 (By similarity); Belongs to the PINc/VapC protein family.
     
 0.872
MJ_0973
3-phosphoadenosine 5-phosphosulfate sulfotransferase (cysH); Similar to GB:M23008 SP:P17854 GB:Y07525 PID:145682 PID:41198 percent identity: 28.57; identified by sequence similarity; putative; In the C-terminal section; belongs to the PAPS reductase family.
       0.773
MJ_0976
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0976.
       0.546
recJ
Conserved hypothetical protein; Single-stranded-DNA-specific exonuclease.
       0.480
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.