STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1027Formate hydrogenlyase, subunit 5; Similar to SP:P16431 GB:X17506 PID:41684 PID:882614 GB:U00096 percent identity: 34.24; identified by sequence similarity; putative; Belongs to the complex I 49 kDa subunit family. (377 aa)    
Predicted Functional Partners:
MJ_0516
Carbon monoxide dehydrogenase, hydrogenase subunit CooL (cooL); Similar to GP:1515468 percent identity: 46.83; identified by sequence similarity; putative.
 
 0.991
MJ_1363
Formate hydrogenlyase, subunit 7; Similar to SP:P16433 GB:X17506 PID:41686 PID:882612 GB:U00096 percent identity: 38.28; identified by sequence similarity; putative.
 
 
 0.978
MJ_1309
Carbon monoxide dehydrogenase, hydrogenase anchor subunit CooM (cooM); Similar to GP:1515466 percent identity: 31.71; identified by sequence similarity; putative.
 
 
 0.967
MJ_0520
NADH-ubiquinone oxidoreductase, subunit 1; Similar to SP:P12772 percent identity: 28.08; identified by sequence similarity; putative; Belongs to the complex I subunit 1 family.
 
 
 0.930
MJ_1362
NADH ubiquinone oxidoreductase, subunit 1 isolog; Similar to SP:P03887 percent identity: 24.02; identified by sequence similarity; putative.
 
 
 0.900
MJ_1302
Photosystem I iron-sulfur center 1 isolog; Identified by sequence similarity; putative.
  
 
 0.896
MJ_1310
Conserved hypothetical protein; Similar to GP:1652328 percent identity: 34.65; identified by sequence similarity; putative.
 
   0.839
MJ_0953
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 52.00; identified by sequence similarity; putative.
  
 
 0.821
MJ_1307
Conserved hypothetical protein; Similar to GP:1652336 percent identity: 36.73; identified by sequence similarity; putative.
 
 
   0.805
MJ_0292
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 45.45; identified by sequence similarity; putative.
  
 
 0.802
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.