STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1052Conserved hypothetical protein; Similar to PID:1226043 percent identity: 30.85; identified by sequence similarity; putative; Belongs to the UPF0045 family. (100 aa)    
Predicted Functional Partners:
MJ_1051
Nodulation protein; Similar to PID:1653353 percent identity: 30.90; identified by sequence similarity; putative; Belongs to the NodU/CmcH family.
       0.795
MJ_1053
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1053.
       0.613
MJ_0413
Nitrate transporter protein (nrtB) homolog (cmpB); Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.502
MJ_0412
Nitrate transporter protein (nrtC) homolog (cmpC); Similar to PID:1019380 percent identity: 47.43; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
  
  
 0.475
thiDN
Conserved hypothetical protein; Catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP, and of HMP to HMP-P. In the C-terminal section; belongs to the ThiN family.
  
    0.457
MJ_0221
H+-transporting ATP synthase, subunit K (atpK); Similar to GB:D16334 GB:X76913 SP:P43457 PID:416405 PID:472919 percent identity: 45.21; identified by sequence similarity; putative.
       0.431
nucS
Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
       0.431
MJ_0810
Conserved hypothetical protein; Similar to GP:949850 percent identity: 33.11; identified by sequence similarity; putative.
       0.431
thiC
Thiamine biosynthesis protein (thiC); Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
       0.431
MJ_1582
Conserved hypothetical protein; Similar to GB:D26185 SP:P37545 PID:467428 GB:AL009126 percent identity: 35.37; identified by sequence similarity; putative.
       0.431
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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