STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1059Capsular polysaccharide biosynthsis protein M; Similar to GB:U10927 SP:P39862 PID:506709 percent identity: 31.91; identified by sequence similarity; putative; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily. (406 aa)    
Predicted Functional Partners:
MJ_1057
Glycosyl transferase, putative; Identified by sequence similarity; putative; Belongs to the glycosyltransferase 2 family.
 
 
 0.822
MJ_1554
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 42.23; identified by sequence similarity; putative.
  
 0.819
MJ_1054
UDP-glucose dehydrogenase, putative; Similar to GP:1651923 percent identity: 43.32; identified by sequence similarity; putative.
 
  
 0.788
MJ_1060
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1060.
       0.773
MJ_1058
Nodulation protein; Similar to PID:1653353 percent identity: 35.19; identified by sequence similarity; putative; Belongs to the NodU/CmcH family.
     
 0.760
MJ_0104
DNA-binding protein, probably DNA helicase; Similar to GB:M64979 GB:L14754 GB:L24544 SP:P38935 PID:401776 percent identity: 34.98; identified by sequence similarity; putative; Belongs to the DNA2/NAM7 helicase family.
   
 
 0.723
MJ_0912
Conserved hypothetical protein; Similar to GP:1788638 percent identity: 31.17; identified by sequence similarity; putative.
   
 
 0.723
MJ_1055
Capsular polysaccharide biosynthesis protein I; Similar to GB:U10927 SP:P39858 PID:506705 percent identity: 50.32; identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.693
MJ_1069
Galactosyltransferase isolog; Similar to GP:1486283 percent identity: 26.38; identified by sequence similarity; putative; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
 
   
 0.683
MJ_1056
Asparagine synthetase (asnB); Similar to GB:J05554 SP:P22106 PID:145393 GB:U00096 PID:1651277 percent identity: 32.95; identified by sequence similarity; putative; Belongs to the asparagine synthetase family.
 
  
 0.615
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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