STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1065Spore coat polysaccharide biosynthesis protein E; Similar to GB:X73124 SP:P39625 PID:413991 GB:AL009126 percent identity: 37.83; identified by sequence similarity; putative; To B.subtilis SpsE. (337 aa)    
Predicted Functional Partners:
MJ_1063
Spore coat polysaccharide biosynthesis protein F (spsF); Similar to GB:X73124 SP:P39626 PID:413992 GB:AL009126 percent identity: 38.94; identified by sequence similarity; putative.
  
 0.990
MJ_1062
Spore coat polysaccharide biosynthesis protein G, putative (spsG); Similar to GB:X73124 SP:P39627 PID:413993 percent identity: 32.60; identified by sequence similarity; putative.
 
  
 0.979
MJ_1066
Spore coat polysaccharide biosynthesis protein C (spsC); Similar to GB:X73124 SP:P39623 PID:413989 GB:AL009126 percent identity: 54.97; identified by sequence similarity; putative.
  
  
 0.931
MJ_1061
Capsular polysaccharide biosynthesis protein D; Similar to GB:U10927 SP:P39853 PID:506700 percent identity: 51.04; identified by sequence similarity; putative; Belongs to the polysaccharide synthase family.
  
  
 0.913
MJ_1064
Galactoside acetyltransferase (lacA); Similar to GB:J01636 SP:P07464 GB:X51872 PID:551814 PID:581122 percent identity: 46.92; identified by sequence similarity; putative; Belongs to the transferase hexapeptide repeat family.
  
  
 0.858
MJ_1069
Galactosyltransferase isolog; Similar to GP:1486283 percent identity: 26.38; identified by sequence similarity; putative; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
  
  
 0.839
MJ_1068
Polysaccharide biosynthesis protein (capF) isolog; Similar to GB:U10927 SP:P39855 PID:506702 percent identity: 21.66; identified by sequence similarity; putative.
  
  
 0.824
wecB
Lipopolysaccharide biosynthesis protein (wbpI); Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP- ManNAc), the activated donor of ManNAc residues; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.808
argG
Argininosuccinate synthetase (argG); Similar to GB:M21315 SP:P13256 PID:150046 percent identity: 71.90; identified by sequence similarity; putative; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
 
 0.709
glmU
Glucose-1-phosphate thymidylyltransferase (strD); Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP-GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1-P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcNAc and pyrophosphate. Also catalyzes the reverse reaction, i.e. the cleavage of UDP-GlcNAc with pyrophosphate to form UTP and GlcNAc-1-P. To a lesser extent, is also able to use dUTP or dTTP as the nucleotide substrate, but not CTP, ATP or GTP; In the N-terminal section; belongs to the N- [...]
  
  
 0.697
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.