Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MJ_1079Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.75; identified by sequence similarity; putative. (397 aa)    
Predicted Functional Partners:
MJ_1078
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1078.
 
   
 0.917
ef1b
Hypothetical protein; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
 
     0.812
serS
seryl-tRNA synthetase (serS); Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.797
rpl10
LSU ribosomal protein L10E; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
 
     0.728
rpl12
LSU ribosomal protein L12A (P1); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family.
 
     0.696
rpl1
LSU ribosomal protein L1P (rplA); Probably involved in E site tRNA release (By similarity). Binds directly to 23S rRNA.
       0.652
MJ_1080
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1080.
     
 0.650
MJ_1134
Conserved hypothetical protein; Similar to GB:L09228 SP:P35154 PID:410131 GB:AL009126 percent identity: 21.63; identified by sequence similarity; putative.
  
     0.620
MJ_1650
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 31.03; identified by sequence similarity; putative.
 
     0.556
recJ
Conserved hypothetical protein; Single-stranded-DNA-specific exonuclease.
  
     0.548
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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