STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1080Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1080. (135 aa)    
Predicted Functional Partners:
MJ_1375
SpoVB isolog; Similar to GB:D26185 SP:P37555 PID:467446 GB:AL009126 percent identity: 23.61; identified by sequence similarity; putative.
  
    0.969
MJ_0638
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0638.
  
    0.958
MJ_1079
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.75; identified by sequence similarity; putative.
     
 0.937
MJ_0420
O-antigen polymerase isolog; Similar to GB:M60066 SP:P26479 PID:154343 percent identity: 26.15; identified by sequence similarity; putative.
  
  
 0.900
uppS
Conserved hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
     
 0.697
MJ_0933
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 40.71; identified by sequence similarity; putative.
      
 0.680
MJ_1141
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 38.92; identified by sequence similarity; putative.
      
 0.679
MJ_1142
Arsenical pump-driving ATPase (arsA); Anion-transporting ATPase. Catalyzes the extrusion of arsenite (By similarity).
      
 0.664
MJ_1081
Conserved hypothetical protein; Similar to SP:P32698 PID:396391 GB:U00096 PID:1790491 percent identity: 38.18; identified by sequence similarity; putative; Belongs to the UPF0047 family.
  
    0.600
MJ_1078
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1078.
  
  
 0.499
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.