Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MJ_1080Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1080. (135 aa)    
Predicted Functional Partners:
MJ_1375
SpoVB isolog; Similar to GB:D26185 SP:P37555 PID:467446 GB:AL009126 percent identity: 23.61; identified by sequence similarity; putative.
  
    0.887
MJ_0638
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0638.
  
    0.876
MJ_0420
O-antigen polymerase isolog; Similar to GB:M60066 SP:P26479 PID:154343 percent identity: 26.15; identified by sequence similarity; putative.
  
  
 0.728
MJ_1079
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 30.75; identified by sequence similarity; putative.
     
 0.650
MJ_1081
Conserved hypothetical protein; Similar to SP:P32698 PID:396391 GB:U00096 PID:1790491 percent identity: 38.18; identified by sequence similarity; putative; Belongs to the UPF0047 family.
  
    0.592
MJ_1082
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 34.78; identified by sequence similarity; putative; To M.jannaschii MJ1503.
       0.498
MJ_1078
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1078.
  
  
 0.496
MJ_1439
Thermonuclease; Similar to GB:L23973 SP:P43270 PID:532653 percent identity: 36.72; identified by sequence similarity; putative; Belongs to the thermonuclease family.
   
    0.434
MJ_0816
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0816.
   
    0.412
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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