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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1082Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 34.78; identified by sequence similarity; putative; To M.jannaschii MJ1503. (120 aa)    
Predicted Functional Partners:
MJ_1081
Conserved hypothetical protein; Similar to SP:P32698 PID:396391 GB:U00096 PID:1790491 percent identity: 38.18; identified by sequence similarity; putative; Belongs to the UPF0047 family.
       0.724
MJ_1083
Iron-sulfur flavoprotein (isf); Redox-active protein probably involved in electron transport; Belongs to the SsuE family. Isf subfamily.
       0.586
MJ_1080
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1080.
       0.498
aroE
Shikimate 5-dehydrogenase (aroE); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.430
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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