STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1155Conserved hypothetical protein; Similar to PID:882546 GB:U00096 PID:1789392 percent identity: 55.72; identified by sequence similarity; putative. (603 aa)    
Predicted Functional Partners:
MJ_1155.1
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 44.33; identified by sequence similarity; putative.
       0.762
MJ_1155.2
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ1155.2.
       0.762
MJ_0888
Conserved hypothetical protein; Similar to SP:P54501 PID:1303871 GB:AL009126 percent identity: 28.66; identified by sequence similarity; putative.
  
  
 0.683
MJ_1582
Conserved hypothetical protein; Similar to GB:D26185 SP:P37545 PID:467428 GB:AL009126 percent identity: 35.37; identified by sequence similarity; putative.
       0.680
MJ_1154
Conserved hypothetical protein; Similar to GP:1561567 percent identity: 32.98; identified by sequence similarity; putative.
       0.536
MJ_0150
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0150; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0716
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0716.
  
  
 0.496
MJ_0739
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0739; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0745
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0745; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0855
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0855.
  
  
 0.496
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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