STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ1226Putative cation-transporting ATPase MJ1226; Similar to SP:P20649 percent identity: 44.42; identified by sequence similarity; putative; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily (805 aa)    
Predicted Functional Partners:
ppaC
Manganese-dependent inorganic pyrophosphatase; Similar to SP:P38698 PID:453695 PID:458943 percent identity: 27.80; identified by sequence similarity; putative; Belongs to the PPase class C family
  
 
 0.914
patS
Soluble P-type ATPase-like phosphatase; Most probably acts as a phosphatase in the cytosol; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily
  
   
 0.880
MJ1227
Putative glycyl-radical enzyme activating enzyme MJ1227; Similar to GB:L42023 SP:P43751 PID:1003258 PID:1222095 PID:1204435 percent identity: 35.58; identified by sequence similarity; putative
       0.846
MJ1225
Uncharacterized protein MJ1225; Similar to SP:P15889 PID:48226 percent identity: 23.19; identified by sequence similarity; putative
  
  
 0.816
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
  
  
 0.661
MJ1275
Probable Na(+)/H(+) antiporter 3; This is probably a Na(+)/H(+) antiporter
 
 0.606
MJ1224
UPF0216 protein MJ1224; Similar to GB:AE000666 percent identity: 44.72; identified by sequence similarity; putative; Belongs to the UPF0216 family
       0.566
atpA
V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit (By similarity)
  
 
 0.548
atpI
V-type ATP synthase subunit I; Produces ATP from ADP in the presence of a proton gradient across the membrane
  
 
 0.535
MJ0688
UPF0146 protein MJ0688; Similar to GB:AE000666 percent identity: 36.79; identified by sequence similarity; putative; Belongs to the UPF0146 family
       0.531
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii DSM2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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