STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFHigh-affinity branched-chain amino acid transport ATP-binding protein (braG); Probable component of a branched-chain amino-acid transport system. (191 aa)    
Predicted Functional Partners:
livM
High-affinity branched-chain amino acid transport protein (braE); Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily.
 
 
 0.999
livG
High-affinity branched-chain amino acid transport ATP-binding protein (braF); Probable component of a branched-chain amino-acid transport system; Belongs to the ABC transporter superfamily.
 
 
0.998
livH
High-affinity branched-chain amino acid transport protein (braD); Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily.
 
 
 0.997
MJ_1266
High-affinity branched-chain amino acid transport protein (braC); Similar to GB:D90223 SP:P21175 GB:M31071 PID:151110 PID:216863 percent identity: 24.92; identified by sequence similarity; putative.
 
 
 0.995
MJ_0873
Ferric enterobactin transport ATP-binding protein; Similar to SP:P23878 GB:X57471 PID:41432 GB:U00096 PID:1778504 percent identity: 35.86; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
   
 0.825
MJ_0035
ABC transporter subunit; Similar to SP:P48255 percent identity: 37.61; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
     0.493
tmk
Thymidylate kinase (tmk); Similar to SP:P36590 percent identity: 31.18; identified by sequence similarity; putative.
  
    0.457
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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