STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1311Conserved hypothetical protein; Similar to SP:P42419 PID:709989 GB:AL009126 percent identity: 31.82; identified by sequence similarity; putative; To M.jannaschii MJ1614 and MJ0008. (293 aa)    
Predicted Functional Partners:
MJ_1312
Conserved hypothetical protein; Similar to GP:1653753 percent identity: 33.00; identified by sequence similarity; putative.
       0.678
MJ_0406
Ribokinase (rbsK); Catalyzes the phosphorylation of a wide range of nucleosides to yield nucleoside monophosphates. Shows the highest activity for inosine, guanosine and cytidine, but very poor kinase activity with adenosine, thymidine, uridine and xanthosine. ATP is the best phosphate donor, but can also use ITP and GTP. Shows extremely low activity with fructose-6-phosphate; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.609
MJ_1336
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1336.
  
  
 0.555
MJ_1310
Conserved hypothetical protein; Similar to GP:1652328 percent identity: 34.65; identified by sequence similarity; putative.
       0.550
cobD
Cobalamin biosynthesis protein B (cbiB); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.503
MJ_1313
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 55.44; identified by sequence similarity; putative; To M.thermoautotrophicum MTH1421.
       0.492
MJ_1315
Conserved hypothetical protein; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of both single-stranded RNA (ssRNA) and single-stranded DNA (ssDNA). Exhibits a strong preference for ssRNA (By similarity).
       0.492
MJ_1316
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 38.46; identified by sequence similarity; putative; Belongs to the UPF0248 family.
       0.492
MJ_1309
Carbon monoxide dehydrogenase, hydrogenase anchor subunit CooM (cooM); Similar to GP:1515466 percent identity: 31.71; identified by sequence similarity; putative.
       0.483
MJ_1307
Conserved hypothetical protein; Similar to GP:1652336 percent identity: 36.73; identified by sequence similarity; putative.
       0.451
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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