STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1312Conserved hypothetical protein; Similar to GP:1653753 percent identity: 33.00; identified by sequence similarity; putative. (321 aa)    
Predicted Functional Partners:
MJ_1313
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 55.44; identified by sequence similarity; putative; To M.thermoautotrophicum MTH1421.
       0.837
cobD
Cobalamin biosynthesis protein B (cbiB); Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.726
MJ_1315
Conserved hypothetical protein; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of both single-stranded RNA (ssRNA) and single-stranded DNA (ssDNA). Exhibits a strong preference for ssRNA (By similarity).
       0.726
MJ_1311
Conserved hypothetical protein; Similar to SP:P42419 PID:709989 GB:AL009126 percent identity: 31.82; identified by sequence similarity; putative; To M.jannaschii MJ1614 and MJ0008.
       0.678
MJ_1316
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 38.46; identified by sequence similarity; putative; Belongs to the UPF0248 family.
       0.593
MJ_1310
Conserved hypothetical protein; Similar to GP:1652328 percent identity: 34.65; identified by sequence similarity; putative.
 
     0.554
pcm
L-isoaspartyl protein carboxyl methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (By similarity).
  
  
 0.523
MJ_1307
Conserved hypothetical protein; Similar to GP:1652336 percent identity: 36.73; identified by sequence similarity; putative.
 
     0.469
MJ_1309
Carbon monoxide dehydrogenase, hydrogenase anchor subunit CooM (cooM); Similar to GP:1515466 percent identity: 31.71; identified by sequence similarity; putative.
       0.419
wtpB
Sulfate transport system permease protein (cysT); Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 
     0.419
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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