Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gmhAPhosphoheptose isomerase (gmhA); Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily. (143 aa)    
Predicted Functional Partners:
MJ_0015
Conserved hypothetical protein; Similar to GB:L42023 SP:P46452 PID:1161410 PID:1220701 PID:1204873 percent identity: 54.55; identified by sequence similarity; putative.
  
  
 0.967
MJ_1607
LPS biosynthesis protein, putative; Similar to PID:1145194 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
    
 0.914
MJ_1336
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1336.
 
   
 0.684
MJ_1334
UDP-glucose pyrophosphorylase (gtaB); Similar to GB:U02258 GB:L43967 SP:P47691 PID:406922 PID:1046172 percent identity: 46.21; identified by sequence similarity; putative.
     
 0.617
dnaG
Conserved hypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
     
 0.472
glmU
Glucose-1-phosphate thymidylyltransferase (strD); Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP-GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1-P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcNAc and pyrophosphate. Also catalyzes the reverse reaction, i.e. the cleavage of UDP-GlcNAc with pyrophosphate to form UTP and GlcNAc-1-P. To a lesser extent, is also able to use dUTP or dTTP as the nucleotide substrate, but not CTP, ATP or GTP; In the N-terminal section; belongs to the N- [...]
  
  
 0.454
MJ_1333.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ1333.1.
       0.430
MJ_1515
Conserved hypothetical protein; Similar to GB:L42023 SP:P44098 PID:1006274 PID:1221153 PID:1205287 percent identity: 35.86; identified by sequence similarity; putative.
       0.411
MJ_0676
Hydrogenase expression/formation protein (hypE); Similar to GB:X52974 SP:P40599 PID:48737 PID:536795 percent identity: 44.88; identified by sequence similarity; putative; Belongs to the HypE family.
     
 0.410
phi
Conserved hypothetical protein; Catalyzes the isomerization between 3-hexulose 6-phosphate and fructose 6-phosphate; Belongs to the SIS family. PHI subfamily.
     
 0.402
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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