Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MJ_1357 | MJ_1358 | MJ_1357 | MJ_1358 | Potassium channel protein, putative; Probable potassium channel protein. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1358. | 0.401 |
MJ_1357 | cbiE | MJ_1357 | MJ_1522 | Potassium channel protein, putative; Probable potassium channel protein. | Cobalamin biosynthesis precorrin-6Y methylase (cbiE); Catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. | 0.463 |
MJ_1357 | mvp | MJ_1357 | MJ_0139 | Potassium channel protein, putative; Probable potassium channel protein. | Potassium channel protein; Voltage-gated potassium-selective channel opened by hyperpolarization. | 0.895 |
MJ_1358 | MJ_1357 | MJ_1358 | MJ_1357 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1358. | Potassium channel protein, putative; Probable potassium channel protein. | 0.401 |
cbiE | MJ_1357 | MJ_1522 | MJ_1357 | Cobalamin biosynthesis precorrin-6Y methylase (cbiE); Catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. | Potassium channel protein, putative; Probable potassium channel protein. | 0.463 |
mvp | MJ_1357 | MJ_0139 | MJ_1357 | Potassium channel protein; Voltage-gated potassium-selective channel opened by hyperpolarization. | Potassium channel protein, putative; Probable potassium channel protein. | 0.895 |